COPASI copasi.org
winget install --id=COPASI.COPASI -e COPASI is a software application for simulation and analysis of biochemical networks and their dynamics. COPASI is a stand-alone program that supports models in the SBML standard and can simulate their behavior using ODEs, SDEs, or Gillespie's stochastic simulation algorithm. Arbitrary discrete events can be included in such simulations. COPASI provides a set analysis methods and parameter estimation.
COPASI is a software application designed for the simulation and analysis of biochemical networks and their dynamics. It supports models in the SBML standard and can simulate their behavior using ordinary differential equations (ODEs), stochastic differential equations (SDEs), or Gillespie's stochastic simulation algorithm, allowing for arbitrary discrete events to be included in simulations.
Key Features:
- SBML Support: Enables the use of models defined in the Systems Biology Markup Language.
- Versatile Simulation Methods: Supports ODEs, SDEs, and Gillespie's algorithm for accurate modeling of biochemical processes.
- Discrete Events Handling: Incorporates arbitrary discrete events into simulations to reflect real-world biological scenarios.
- Comprehensive Analysis Tools: Provides a suite of analysis methods to evaluate model behavior and dynamics.
- Parameter Estimation: Facilitates the estimation of model parameters, enhancing accuracy and applicability.
Audience & Benefit: COPASI is ideal for researchers, systems biologists, biochemists, and students involved in studying biochemical pathways. It aids in understanding cellular processes, supports hypothesis testing, and enables accurate predictions, thereby advancing research and insights in systems biology. The software can be installed via winget, ensuring ease of integration into existing workflows.