Chromas Technelysium Pty Ltd
winget install --id=Technelysium.Chromas -e Chromas is a free trace viewer for simple DNA sequencing projects which do not require assembly of multiple sequences. Chromas has the following features: - Opens .ab1 chromatogram files from Applied Biosystems DNA sequencers. - Opens SCF and ZTR format chromatogram files created by other sequencers or retrieved from databases. - Save in .scf or Applied Biosystems .ab1 format. - Print a chromatogram with options to zoom or fit to one page. - Automatic removal of low-quality sequence (when quality data is available) or vector sequences. - Export sequences in plain text, FASTA, FASTQ, EMBL, GenBank or GCG formats, or formatted with base numbering for presentation. - Copy the sequence to the clipboard in plain text, FASTA or FASTQ format for pasting into other applications. - Reverse & complement the sequence and chromatogram. - Search for subsequences by exact matching or optimal alignment. - Display translations in 3 frames along with the sequence. - Copy an image of a chromatogram section for pasting into documents or presentations. - Batch processing, including format conversion, sequence export with vector removal, batch printing and batch export of raw data. - Enhance .ab1 files using the PeakTrace RP component from Nucleics Pty Ltd to improve peak readability and extract more high-quality bases.
Chromas is a free trace viewer designed for simple DNA sequencing projects that do not require assembly of multiple sequences. It enables the visualization and analysis of chromatograms generated by various DNA sequencers, providing researchers with essential tools for sequence examination and processing.
Key Features:
- Opens .ab1 chromatogram files from Applied Biosystems sequencers and supports SCF and ZTR formats from other sequencers or databases.
- Automatically removes low-quality sequences and vector segments when quality data is available.
- Exports sequences in multiple formats, including FASTA, FASTQ, EMBL, GenBank, and GCG, for seamless integration with other bioinformatics tools.
- Enhances .ab1 files using the PeakTrace RP component to improve peak readability and extract higher-quality bases.
- Facilitates batch processing for format conversion, sequence export, printing, and raw data extraction, streamlining workflows for large-scale projects.
Audience & Benefit: Ideal for researchers, students, and professionals in molecular biology or genetics who need a straightforward tool for DNA sequencing analysis. Chromas empowers users to efficiently view, analyze, and process chromatograms without the complexity of assembly tools, making it an essential resource for focused DNA sequencing studies. It can be installed via winget for easy setup on supported systems.